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14:31
YouTube
Genomics Boot Camp
How to compute linkage disequilibrium with PLINK | Genomics
This video shows the practical computation of #LD with #PLINK in three parts: 1) general options to calculate #LD using #PLINK 2) visualization of LD decay (using #tidyverse) 3) an example of LD pruning #genetics #genomics #linkage The R script is here: https://pastebin.com/FMdqpiEJ Data from the WIDDE database (see the sheep and cattle tabs on ...
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